Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs10445584 chr19:52882805 C/T ZNF880 chr19:52873170-52889048:+ 0.81 7.12 3.17E-9 Box Plot
ACC rs10445585 chr19:52882824 T/A ZNF880 chr19:52873170-52889048:+ 0.81 7.12 3.17E-9 Box Plot
ACC rs10445586 chr19:52883123 T/C ZNF880 chr19:52873170-52889048:+ 0.8 7.07 3.86E-9 Box Plot
ACC rs10448014 chr8:71688165 G/A XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs10454564 chr13:42066474 A/G ELF1 chr13:41506164-41635576:- 0.99 5.07 5.31E-6 Box Plot
ACC rs10460516 chr2:88465998 C/G THNSL2 chr2:88469814-88486155:+ 0.83 6.58 2.33E-8 Box Plot
ACC rs1046395 chr5:96273180 G/A ERAP2 chr5:96211643-96255420:+ 0.94 11.24 1.6E-15 Box Plot
ACC rs1046396 chr5:96273187 G/A ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs10476696 chr5:96319607 T/G ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs1048365 chr7:100804430 C/T AP1S1 chr7:100797678-100804877:+ 0.73 5.48 1.27E-6 Box Plot
ACC rs10483855 chr14:74283413 G/A LIN52 chr14:74551499-74667938:+ 0.47 5.33 2.12E-6 Box Plot
ACC rs10488497 chr7:76342579 C/G POMZP3 chr7:76239303-76256578:- 0.86 6.02 1.8E-7 Box Plot
ACC rs1049677 chr7:97483921 G/C TECPR1 chr7:97843936-97881563:- 0.79 5.17 3.75E-6 Box Plot
ACC rs10504479 chr8:71577515 T/A XKR9 chr8:71581600-71702606:+ 0.65 6.66 1.71E-8 Box Plot
ACC rs10504481 chr8:71699517 T/G XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot